I followed a 2-part molecular docking tutorial on YouTube by Sanket Bapat exactly protein prep by removing H2O, adding hydrogen and kollman charges grid box is in its automatic state https://preview.redd.it/t63bb8b4ez3h1.png?width=1366&format=png&auto=webp&s=7bde5dfe0b21964b87026d129299b2f67cda5212 things I did differently from the video: changed the ligand to koetjapic acid and manually put the log.txt bc there wasn't a --log option when i was trying to do it on cmd I've also tried splitting the output states, but it only showed one 😥 Please tell me if I need to provide more info! TYSM! https://preview.redd.it/k9onkv0zgz3h1.png?width=1366&format=png&auto=webp&s=d24701715feee23d1e87dc34102b2bed875531c6 submitted by /u/hope_jipe [link] [comments]