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How to define genes expressed is certain cluster in scRNA-seq data?

Reddit r/bioinformatics·u/sky_porcupine·about 1 month ago
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How to define genes expressed is certain cluster in scRNA-seq data? Hi guys, How do you define whether the given gene is expressed in a certain cluster in the scRNA-seq data? How do you set thresholds? UMI>0? In what proportion of cells? Do you do some more sophisticated statistical evaluation? What's your recommendation? Let's discuss.

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