Commits on May 1, 2026 ref-only mode + interactive git-init prompt (v0.40.0) Standalone mode is removed. Every .morph/ in the world is now a per-clone reference-mode wrapper next to a .git/. .morph/ is in .git/info/exclude automatically; teammates pulling git see ordinary git commits. morph init now requires a git repo. When run outside a working tree, it prompts: "Run \`git init\` for you? [y/N]". Pressing Enter (or running non-interactively) exits non-zero with the recipe. New flags --git-init / --no-git-init for scripted setups. morph commit now wraps git commit (runs git add -A, passes --allow-empty + --allow-empty-message) so behavioral checkpoints work even without staged file changes. morph upgrade migrates legacy Standalone repos: drops the repo_mode key, captures init_at_git_sha, writes .git/info/exclude, installs the four reference-mode hooks. Hard-errors when there is no .git/ alongside (with the recipe).…